Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APEX1P27695 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APEX1P27695 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 TSPY16P-201ENST00000449843 468 ntBASIC13.83□□□□□ -0.2
APEX1P27695 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.83□□□□□ -0.2
APEX1P27695 AC190387.1-201ENST00000551683 408 ntBASIC13.83□□□□□ -0.2
APEX1P27695 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 AL033527.5-202ENST00000641632 1098 ntBASIC13.83□□□□□ -0.2
APEX1P27695 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.83□□□□□ -0.2
APEX1P27695 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APEX1P27695 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APEX1P27695 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.82□□□□□ -0.2
APEX1P27695 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.82□□□□□ -0.2
APEX1P27695 AC236430.1-201ENST00000402231 743 ntBASIC13.82□□□□□ -0.2
APEX1P27695 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.82□□□□□ -0.2
APEX1P27695 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.82□□□□□ -0.2
APEX1P27695 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.82□□□□□ -0.2
APEX1P27695 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.82□□□□□ -0.2
APEX1P27695 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.82□□□□□ -0.2
APEX1P27695 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.82□□□□□ -0.2
APEX1P27695 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.82□□□□□ -0.2
APEX1P27695 AC239800.4-201ENST00000603712 296 ntBASIC13.82□□□□□ -0.2
APEX1P27695 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.82□□□□□ -0.2
APEX1P27695 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
APEX1P27695 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APEX1P27695 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms