Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AL157414.3-201ENST00000624276 1954 ntBASIC13.8□□□□□ -0.2
GDF1P27539 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 AL359258.3-201ENST00000622910 2331 ntBASIC13.79□□□□□ -0.2
GDF1P27539 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF1P27539 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 MIR1202-201ENST00000408529 83 ntBASIC13.79□□□□□ -0.2
GDF1P27539 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 EIF3FP3-201ENST00000434851 1086 ntBASIC13.79□□□□□ -0.2
GDF1P27539 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF1P27539 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.79□□□□□ -0.2
GDF1P27539 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF1P27539 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 AC010328.2-201ENST00000597698 1111 ntBASIC13.79□□□□□ -0.2
GDF1P27539 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GDF1P27539 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 AC023024.2-201ENST00000623561 1993 ntBASIC13.79□□□□□ -0.2
GDF1P27539 AC112693.3-201ENST00000624819 1983 ntBASIC13.79□□□□□ -0.2
GDF1P27539 AHCYP2-201ENST00000430630 1300 ntBASIC13.79□□□□□ -0.2
GDF1P27539 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.79□□□□□ -0.2
GDF1P27539 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GDF1P27539 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.79□□□□□ -0.2
GDF1P27539 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
GDF1P27539 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF1P27539 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF1P27539 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
GDF1P27539 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
GDF1P27539 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 HLA-K-203ENST00000430151 1046 ntBASIC13.78□□□□□ -0.2
GDF1P27539 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.78□□□□□ -0.2
GDF1P27539 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF1P27539 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.78□□□□□ -0.2
GDF1P27539 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.78□□□□□ -0.2
GDF1P27539 AL603764.1-201ENST00000636452 321 ntBASIC13.78□□□□□ -0.2
GDF1P27539 AL033527.4-201ENST00000641026 673 ntBASIC13.78□□□□□ -0.2
GDF1P27539 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 AL360270.3-201ENST00000609118 1348 ntBASIC13.78□□□□□ -0.2
GDF1P27539 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF1P27539 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GDF1P27539 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF1P27539 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms