Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.07■□□□□ 0
VARSP26640 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.07■□□□□ 0
VARSP26640 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.07■□□□□ 0
VARSP26640 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.07■□□□□ 0
VARSP26640 AC004840.1-201ENST00000636359 365 ntBASIC15.07■□□□□ 0
VARSP26640 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VARSP26640 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 AC005912.2-201ENST00000619492 2400 ntBASIC15.07■□□□□ 0
VARSP26640 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VARSP26640 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.07■□□□□ 0
VARSP26640 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.07■□□□□ 0
VARSP26640 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 BTBD7P1-201ENST00000447253 1453 ntBASIC15.07■□□□□ 0
VARSP26640 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VARSP26640 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VARSP26640 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARSP26640 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.07■□□□□ 0
VARSP26640 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VARSP26640 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VARSP26640 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VARSP26640 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 AC232323.1-201ENST00000540724 2099 ntBASIC15.06■□□□□ 0
VARSP26640 REXO1L5P-201ENST00000622260 2098 ntBASIC15.06■□□□□ 0
VARSP26640 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 ARSEP1-201ENST00000420443 635 ntBASIC15.06■□□□□ 0
VARSP26640 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 AC114501.2-201ENST00000439631 535 ntBASIC15.06■□□□□ 0
VARSP26640 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.06■□□□□ 0
VARSP26640 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 AL589987.1-201ENST00000453380 819 ntBASIC15.06■□□□□ 0
VARSP26640 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.06■□□□□ 0
VARSP26640 AL390728.6-201ENST00000566446 1246 ntBASIC15.06■□□□□ 0
VARSP26640 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
VARSP26640 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.06■□□□□ 0
VARSP26640 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VARSP26640 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VARSP26640 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VARSP26640 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.06■□□□□ 0
VARSP26640 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VARSP26640 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
VARSP26640 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
VARSP26640 AL390755.1-201ENST00000623716 2027 ntBASIC15.05■□□□□ 0
VARSP26640 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.05■□□□□ 0
VARSP26640 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
VARSP26640 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARSP26640 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARSP26640 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.05■□□□□ 0
VARSP26640 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
VARSP26640 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VARSP26640 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARSP26640 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARSP26640 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARSP26640 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VARSP26640 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.05■□□□□ -0
VARSP26640 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.05■□□□□ -0
VARSP26640 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.05■□□□□ -0
VARSP26640 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.05■□□□□ -0
VARSP26640 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.05■□□□□ -0
VARSP26640 AC135586.1-201ENST00000539323 574 ntBASIC15.05■□□□□ -0
VARSP26640 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VARSP26640 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.05■□□□□ -0
VARSP26640 AC015910.1-201ENST00000579400 975 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms