Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 LINC00528-201ENST00000600723 2160 ntBASIC14.51□□□□□ -0.09
LAMA1P25391 AL583805.1-201ENST00000391389 531 ntBASIC14.51□□□□□ -0.09
LAMA1P25391 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.51□□□□□ -0.09
LAMA1P25391 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.51□□□□□ -0.09
LAMA1P25391 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LAMA1P25391 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.51□□□□□ -0.09
LAMA1P25391 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.5□□□□□ -0.09
LAMA1P25391 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 AL157407.1-201ENST00000435784 904 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LAMA1P25391 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.5□□□□□ -0.09
LAMA1P25391 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.5□□□□□ -0.09
LAMA1P25391 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LAMA1P25391 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 RN7SKP230-201ENST00000365642 335 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.5□□□□□ -0.09
LAMA1P25391 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.5□□□□□ -0.09
LAMA1P25391 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 MIR6769A-201ENST00000617340 73 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 FO393412.1-201ENST00000619841 382 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 AC009560.1-201ENST00000620208 434 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.5□□□□□ -0.09
LAMA1P25391 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LAMA1P25391 AQP7P5-201ENST00000428759 1049 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 AQP7P4-201ENST00000447083 1042 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 AQP7P2-201ENST00000453967 1041 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 AP003392.6-201ENST00000607709 325 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 AQP7P3-201ENST00000624547 1041 ntBASIC14.5□□□□□ -0.09
LAMA1P25391 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LAMA1P25391 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.5□□□□□ -0.09
LAMA1P25391 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LAMA1P25391 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.49□□□□□ -0.09
LAMA1P25391 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.49□□□□□ -0.09
LAMA1P25391 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.49□□□□□ -0.09
LAMA1P25391 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.49□□□□□ -0.09
LAMA1P25391 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 DOC2GP-204ENST00000639052 2548 ntBASIC14.49□□□□□ -0.09
LAMA1P25391 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
LAMA1P25391 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LAMA1P25391 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LAMA1P25391 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.49□□□□□ -0.09
LAMA1P25391 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms