Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.91□□□□□ -0.18
CD53P19397 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD53P19397 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CD53P19397 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD53P19397 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD53P19397 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.91□□□□□ -0.18
CD53P19397 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CD53P19397 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.9□□□□□ -0.18
CD53P19397 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
CD53P19397 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 AC022210.1-201ENST00000449856 793 ntBASIC13.9□□□□□ -0.18
CD53P19397 RN7SL837P-201ENST00000463010 287 ntBASIC13.9□□□□□ -0.18
CD53P19397 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.9□□□□□ -0.18
CD53P19397 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.9□□□□□ -0.18
CD53P19397 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.9□□□□□ -0.18
CD53P19397 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.9□□□□□ -0.18
CD53P19397 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CD53P19397 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.9□□□□□ -0.18
CD53P19397 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CD53P19397 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CD53P19397 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.9□□□□□ -0.18
CD53P19397 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD53P19397 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.19
CD53P19397 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CD53P19397 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CD53P19397 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 PHKG1P2-201ENST00000457537 863 ntBASIC13.89□□□□□ -0.19
CD53P19397 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms