Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DMBT1P1-203ENST00000636837 4628 ntBASIC18.25■□□□□ 0.51
NCLP19338 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NCLP19338 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 ZBED1P1-201ENST00000502364 1930 ntBASIC18.25■□□□□ 0.51
NCLP19338 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 CYP4F24P-201ENST00000586049 1580 ntBASIC18.25■□□□□ 0.51
NCLP19338 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCLP19338 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NCLP19338 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
NCLP19338 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 AC142381.1-201ENST00000426099 345 ntBASIC18.24■□□□□ 0.51
NCLP19338 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.24■□□□□ 0.51
NCLP19338 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.24■□□□□ 0.51
NCLP19338 AC106028.4-201ENST00000614509 607 ntBASIC18.24■□□□□ 0.51
NCLP19338 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.24■□□□□ 0.51
NCLP19338 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NCLP19338 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCLP19338 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCLP19338 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NCLP19338 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 SPCS2P4-201ENST00000436160 681 ntBASIC18.23■□□□□ 0.51
NCLP19338 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.23■□□□□ 0.51
NCLP19338 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 PHKG1P2-201ENST00000457537 863 ntBASIC18.23■□□□□ 0.51
NCLP19338 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.23■□□□□ 0.51
NCLP19338 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.23■□□□□ 0.51
NCLP19338 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.23■□□□□ 0.51
NCLP19338 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 AC025678.2-201ENST00000562061 970 ntBASIC18.23■□□□□ 0.51
NCLP19338 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLP19338 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLP19338 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms