Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 AC104596.2-201ENST00000512793 793 ntBASIC18.4■□□□□ 0.54
ZKSCAN1P17029 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 FAM8A2P-201ENST00000528813 1142 ntBASIC18.4■□□□□ 0.54
ZKSCAN1P17029 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 REXO1L2P-201ENST00000425429 2069 ntBASIC18.4■□□□□ 0.54
ZKSCAN1P17029 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 AJ011931.1-201ENST00000618749 2492 ntBASIC18.4■□□□□ 0.54
ZKSCAN1P17029 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZKSCAN1P17029 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZKSCAN1P17029 CLK3P2-201ENST00000427566 1453 ntBASIC18.39■□□□□ 0.54
ZKSCAN1P17029 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZKSCAN1P17029 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZKSCAN1P17029 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZKSCAN1P17029 REXO1L4P-201ENST00000605109 1937 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC099063.4-201ENST00000641099 1602 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 KRT43P-201ENST00000434019 910 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 BNIP3P42-201ENST00000454982 569 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 BNIP3P29-201ENST00000598302 571 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AL391069.4-201ENST00000609583 481 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC011447.5-201ENST00000616168 564 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 ACE3P-201ENST00000423435 1973 ntBASIC18.39■□□□□ 0.53
ZKSCAN1P17029 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZKSCAN1P17029 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ZKSCAN1P17029 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms