Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AL645939.2-201ENST00000427340 991 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.47□□□□□ -0.41
DEFA4P12838 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.47□□□□□ -0.41
DEFA4P12838 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 AC093520.2-201ENST00000561830 333 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.47□□□□□ -0.41
DEFA4P12838 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 MIR4453-201ENST00000584019 89 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 CICP14-201ENST00000629111 2732 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 FP325330.2-201ENST00000624219 5630 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.46□□□□□ -0.41
DEFA4P12838 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.46□□□□□ -0.41
DEFA4P12838 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 SPDYE14P-201ENST00000442619 822 ntBASIC12.46□□□□□ -0.41
DEFA4P12838 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 EEF1DP4-201ENST00000446006 880 ntBASIC12.46□□□□□ -0.41
DEFA4P12838 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 AC004967.1-201ENST00000453589 447 ntBASIC12.46□□□□□ -0.41
DEFA4P12838 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.46□□□□□ -0.41
DEFA4P12838 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 AL589739.1-201ENST00000607720 493 ntBASIC12.46□□□□□ -0.41
DEFA4P12838 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
DEFA4P12838 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.46□□□□□ -0.41
DEFA4P12838 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
DEFA4P12838 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.46□□□□□ -0.42
DEFA4P12838 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.46□□□□□ -0.42
DEFA4P12838 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.46□□□□□ -0.42
DEFA4P12838 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 AC010327.5-201ENST00000586923 3061 ntBASIC12.46□□□□□ -0.42
DEFA4P12838 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
DEFA4P12838 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms