Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC243960.2-201ENST00000600996 747 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 ECM1P1-201ENST00000604092 1279 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC126755.1-201ENST00000525846 6405 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AC015818.8-201ENST00000587907 1519 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.35□□□□□ -0.11
RAB40ALP0C0E4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 KRT8P13-201ENST00000463294 1010 ntBASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AL022328.3-201ENST00000607943 679 ntBASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40ALP0C0E4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 PPT1-215ENST00000641471 2368 ntBASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40ALP0C0E4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms