Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPNS1P04632 MIR5572-201ENST00000583188 137 ntBASIC15.18■□□□□ 0.02
CAPNS1P04632 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPNS1P04632 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.18■□□□□ 0.02
CAPNS1P04632 RHOXF1P1-202ENST00000635473 501 ntBASIC15.18■□□□□ 0.02
CAPNS1P04632 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.18■□□□□ 0.02
CAPNS1P04632 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 AC138028.6-201ENST00000616106 1482 ntBASIC15.18■□□□□ 0.02
CAPNS1P04632 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPNS1P04632 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPNS1P04632 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CAPNS1P04632 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 AL137784.3-201ENST00000623858 2288 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.17■□□□□ 0.02
CAPNS1P04632 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 AC104457.1-201ENST00000401024 814 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPNS1P04632 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPNS1P04632 UPF3AP2-201ENST00000457924 1132 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 MIR3619-201ENST00000579667 83 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 AC244669.2-201ENST00000612320 853 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 AL008638.5-201ENST00000623814 1298 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 AC128714.1-201ENST00000637035 887 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPNS1P04632 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 Z97205.2-201ENST00000564697 1639 ntBASIC15.17■□□□□ 0.02
CAPNS1P04632 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPNS1P04632 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPNS1P04632 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPNS1P04632 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPNS1P04632 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CAPNS1P04632 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CAPNS1P04632 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CAPNS1P04632 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.16■□□□□ 0.02
CAPNS1P04632 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPNS1P04632 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPNS1P04632 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CAPNS1P04632 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPNS1P04632 AC005077.2-201ENST00000449786 690 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms