Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.5□□□□□ -0.57
LTAP01374 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LTAP01374 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LTAP01374 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.49□□□□□ -0.57
LTAP01374 AL353705.2-201ENST00000428243 662 ntBASIC11.49□□□□□ -0.57
LTAP01374 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.49□□□□□ -0.57
LTAP01374 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.49□□□□□ -0.57
LTAP01374 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.49□□□□□ -0.57
LTAP01374 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.49□□□□□ -0.57
LTAP01374 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.49□□□□□ -0.57
LTAP01374 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
LTAP01374 KRT8P24-201ENST00000560290 1559 ntBASIC11.49□□□□□ -0.57
LTAP01374 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.49□□□□□ -0.57
LTAP01374 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LTAP01374 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LTAP01374 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.48□□□□□ -0.57
LTAP01374 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LTAP01374 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
LTAP01374 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.48□□□□□ -0.57
LTAP01374 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
LTAP01374 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
LTAP01374 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LTAP01374 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
LTAP01374 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.48□□□□□ -0.57
LTAP01374 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.48□□□□□ -0.57
LTAP01374 ADH5P3-201ENST00000433842 1137 ntBASIC11.48□□□□□ -0.57
LTAP01374 SPDYE11-202ENST00000450699 704 ntBASIC11.48□□□□□ -0.57
LTAP01374 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.48□□□□□ -0.57
LTAP01374 RNA5SP419-201ENST00000515908 135 ntBASIC11.48□□□□□ -0.57
LTAP01374 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LTAP01374 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.48□□□□□ -0.57
LTAP01374 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.48□□□□□ -0.57
LTAP01374 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LTAP01374 AC145285.3-201ENST00000564603 959 ntBASIC11.48□□□□□ -0.57
LTAP01374 SPDYE9P-201ENST00000570642 692 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms