Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 AC069120.2-201ENST00000524091 540 ntBASIC13.8□□□□□ -0.2
PPP1R3DO95685 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 SAMD11P1-201ENST00000571429 661 ntBASIC13.8□□□□□ -0.2
PPP1R3DO95685 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 LINC01230-201ENST00000625222 3017 ntBASIC13.8□□□□□ -0.2
PPP1R3DO95685 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 LILRP1-201ENST00000444199 1370 ntBASIC13.8□□□□□ -0.2
PPP1R3DO95685 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.8□□□□□ -0.2
PPP1R3DO95685 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP1R3DO95685 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 KLF2P3-201ENST00000451977 1087 ntBASIC13.79□□□□□ -0.2
PPP1R3DO95685 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 AC004449.1-201ENST00000564240 433 ntBASIC13.79□□□□□ -0.2
PPP1R3DO95685 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP1R3DO95685 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PPP1R3DO95685 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP1R3DO95685 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP1R3DO95685 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP1R3DO95685 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PPP1R3DO95685 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP1R3DO95685 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP1R3DO95685 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms