Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDRT1O95170 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 GHSR-202ENST00000427970 912 ntBASIC13.65□□□□□ -0.22
CDRT1O95170 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 RARRES2P8-201ENST00000566335 367 ntBASIC13.65□□□□□ -0.22
CDRT1O95170 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.65□□□□□ -0.22
CDRT1O95170 AC138969.3-201ENST00000546612 1459 ntBASIC13.65□□□□□ -0.22
CDRT1O95170 AC138932.2-201ENST00000548268 1459 ntBASIC13.65□□□□□ -0.22
CDRT1O95170 AC126755.4-201ENST00000549796 1459 ntBASIC13.65□□□□□ -0.22
CDRT1O95170 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.65□□□□□ -0.22
CDRT1O95170 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.65□□□□□ -0.22
CDRT1O95170 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDRT1O95170 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDRT1O95170 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDRT1O95170 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 FOXO1B-201ENST00000504678 1527 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 AC005562.1-201ENST00000583030 3219 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 AL607033.1-201ENST00000623900 1599 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CDRT1O95170 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.64□□□□□ -0.23
CDRT1O95170 AC105233.2-201ENST00000523697 349 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 AF228730.5-201ENST00000530288 346 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.64□□□□□ -0.23
CDRT1O95170 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 AC073389.1-201ENST00000595595 795 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.64□□□□□ -0.23
CDRT1O95170 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CDRT1O95170 AC092865.6-201ENST00000642101 219 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDRT1O95170 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.64□□□□□ -0.23
CDRT1O95170 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 AC131212.3-201ENST00000624087 4219 ntBASIC13.64□□□□□ -0.23
CDRT1O95170 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDRT1O95170 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDRT1O95170 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms