Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK1BO75841 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK1BO75841 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 AP001972.5-201ENST00000624624 2338 ntBASIC13.27□□□□□ -0.29
UPK1BO75841 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.27□□□□□ -0.29
UPK1BO75841 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.26□□□□□ -0.29
UPK1BO75841 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
UPK1BO75841 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 ATP5G1P1-201ENST00000448724 379 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.26□□□□□ -0.29
UPK1BO75841 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 AC072061.1-201ENST00000569710 2234 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 AP005117.1-201ENST00000584346 1413 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 Z69720.1-201ENST00000601483 472 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 ITM2C-210ENST00000620962 501 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 AC131212.3-201ENST00000624087 4219 ntBASIC13.26□□□□□ -0.29
UPK1BO75841 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
UPK1BO75841 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK1BO75841 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
UPK1BO75841 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.25□□□□□ -0.29
UPK1BO75841 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 AC010203.1-204ENST00000548782 407 ntBASIC13.25□□□□□ -0.29
UPK1BO75841 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 NTF6B-201ENST00000591913 560 ntBASIC13.25□□□□□ -0.29
UPK1BO75841 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.25□□□□□ -0.29
UPK1BO75841 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms