Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 TUBB3P1-201ENST00000405796 1332 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 AL360270.3-201ENST00000609118 1348 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.88□□□□□ -0.35
PDCD6O75340 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
PDCD6O75340 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 AC069120.2-201ENST00000524091 540 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 AC109322.1-201ENST00000524499 1264 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 ZNF890P-202ENST00000530367 1156 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 Z92544.3-201ENST00000624747 417 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PDCD6O75340 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PDCD6O75340 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.88□□□□□ -0.35
PDCD6O75340 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.88□□□□□ -0.35
PDCD6O75340 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
PDCD6O75340 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PDCD6O75340 AC087499.5-201ENST00000452760 1342 ntBASIC12.88□□□□□ -0.35
PDCD6O75340 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
PDCD6O75340 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.87□□□□□ -0.35
PDCD6O75340 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.87□□□□□ -0.35
PDCD6O75340 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.87□□□□□ -0.35
PDCD6O75340 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.87□□□□□ -0.35
PDCD6O75340 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 AC044860.1-202ENST00000559481 777 ntBASIC12.87□□□□□ -0.35
PDCD6O75340 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.87□□□□□ -0.35
PDCD6O75340 AC134684.3-201ENST00000641758 218 ntBASIC12.87□□□□□ -0.35
PDCD6O75340 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms