Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 RN7SL48P-201ENST00000579283 293 ntBASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC104982.3-201ENST00000581995 514 ntBASIC15.12■□□□□ 0.01
PCDHGA12O60330 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA12O60330 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA12O60330 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 NUS1P3-201ENST00000423502 862 ntBASIC15.11■□□□□ 0.01
PCDHGA12O60330 BX284668.4-201ENST00000453917 508 ntBASIC15.11■□□□□ 0.01
PCDHGA12O60330 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA12O60330 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA12O60330 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA12O60330 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 RN7SL190P-201ENST00000582519 257 ntBASIC15.1■□□□□ 0.01
PCDHGA12O60330 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA12O60330 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms