Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OR10B1P-201ENST00000601666 907 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 INE2-201ENST00000630399 1874 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 MIR1908-201ENST00000410394 80 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 ACE3P-201ENST00000423435 1973 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.3■□□□□ 0.04
SMAD6O43541 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 AC106820.3-201ENST00000561653 397 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.3■□□□□ 0.04
SMAD6O43541 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 AGAP7P-201ENST00000582299 2062 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMAD6O43541 LINC00528-201ENST00000600723 2160 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 AC023157.3-201ENST00000619086 2088 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 AGAP14-201ENST00000624701 2060 ntBASIC15.3■□□□□ 0.04
SMAD6O43541 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.3■□□□□ 0.04
SMAD6O43541 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.3■□□□□ 0.04
SMAD6O43541 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.3■□□□□ 0.04
SMAD6O43541 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMAD6O43541 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.3■□□□□ 0.04
SMAD6O43541 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMAD6O43541 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 ZBED1P1-201ENST00000502364 1930 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 TUBB1P2-201ENST00000422712 1306 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 TUBB1P1-201ENST00000503144 1300 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 CNN2P10-201ENST00000443067 918 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 COX5BP1-201ENST00000507622 393 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 AP006547.1-201ENST00000563435 692 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.29■□□□□ 0.04
SMAD6O43541 AC073413.1-201ENST00000603927 732 ntBASIC15.29■□□□□ 0.04
SMAD6O43541 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.29■□□□□ 0.04
SMAD6O43541 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms