Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 MCCD1P2-201ENST00000423228 335 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 FAM58DP-201ENST00000428076 619 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 MTND6P24-201ENST00000440466 518 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.47■□□□□ 0.07
RIPK2O43353 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 AL079307.3-201ENST00000556114 283 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
RIPK2O43353 MIR6069-201ENST00000620069 79 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 AL157414.3-201ENST00000624276 1954 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RIPK2O43353 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RIPK2O43353 AGGF1P1-201ENST00000509500 2073 ntBASIC15.47■□□□□ 0.07
RIPK2O43353 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.47■□□□□ 0.07
RIPK2O43353 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 AC107918.4-201ENST00000641966 3141 ntBASIC15.46■□□□□ 0.07
RIPK2O43353 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.46■□□□□ 0.07
RIPK2O43353 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.46■□□□□ 0.07
RIPK2O43353 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 LINC00628-201ENST00000628516 1289 ntBASIC15.46■□□□□ 0.07
RIPK2O43353 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RIPK2O43353 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RIPK2O43353 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RIPK2O43353 ST20-AS1-201ENST00000560255 4223 ntBASIC15.46■□□□□ 0.06
RIPK2O43353 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RIPK2O43353 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.46■□□□□ 0.06
RIPK2O43353 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RIPK2O43353 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.45■□□□□ 0.06
RIPK2O43353 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.45■□□□□ 0.06
RIPK2O43353 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 TOMM22P5-201ENST00000416399 439 ntBASIC15.45■□□□□ 0.06
RIPK2O43353 AL590627.1-203ENST00000421194 1026 ntBASIC15.45■□□□□ 0.06
RIPK2O43353 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms