Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLDN5O00501 AGAP7P-201ENST00000582299 2062 ntBASIC16.01■□□□□ 0.15
CLDN5O00501 AGAP14-201ENST00000624701 2060 ntBASIC16.01■□□□□ 0.15
CLDN5O00501 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16■□□□□ 0.15
CLDN5O00501 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 AC104640.1-201ENST00000562617 2109 ntBASIC16■□□□□ 0.15
CLDN5O00501 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16■□□□□ 0.15
CLDN5O00501 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLDN5O00501 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16■□□□□ 0.15
CLDN5O00501 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16■□□□□ 0.15
CLDN5O00501 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16■□□□□ 0.15
CLDN5O00501 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16■□□□□ 0.15
CLDN5O00501 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 HNRNPA1P48-202ENST00000565308 961 ntBASIC16■□□□□ 0.15
CLDN5O00501 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16■□□□□ 0.15
CLDN5O00501 AL033527.4-201ENST00000641026 673 ntBASIC16■□□□□ 0.15
CLDN5O00501 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16■□□□□ 0.15
CLDN5O00501 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN5O00501 ACE3P-201ENST00000423435 1973 ntBASIC16■□□□□ 0.15
CLDN5O00501 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN5O00501 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN5O00501 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16■□□□□ 0.15
CLDN5O00501 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 AL354989.2-201ENST00000435838 1540 ntBASIC15.99■□□□□ 0.15
CLDN5O00501 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 CLUHP2-201ENST00000426660 1303 ntBASIC15.99■□□□□ 0.15
CLDN5O00501 AHCYP2-201ENST00000430630 1300 ntBASIC15.99■□□□□ 0.15
CLDN5O00501 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.99■□□□□ 0.15
CLDN5O00501 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN5O00501 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.99■□□□□ 0.15
CLDN5O00501 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 AC009542.2-202ENST00000619004 1067 ntBASIC15.99■□□□□ 0.15
CLDN5O00501 AC008687.7-202ENST00000637404 953 ntBASIC15.99■□□□□ 0.15
CLDN5O00501 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.99■□□□□ 0.15
CLDN5O00501 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN5O00501 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN5O00501 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN5O00501 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN5O00501 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN5O00501 TCAF2P1-201ENST00000291129 2421 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms