Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
O00370 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.23■□□□□ 0.19
O00370 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 NUS1P3-201ENST00000423502 862 ntBASIC16.23■□□□□ 0.19
O00370 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
O00370 RN7SL837P-201ENST00000463010 287 ntBASIC16.23■□□□□ 0.19
O00370 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
O00370 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
O00370 AP001063.1-201ENST00000568332 529 ntBASIC16.23■□□□□ 0.19
O00370 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.23■□□□□ 0.19
O00370 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
O00370 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.23■□□□□ 0.19
O00370 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
O00370 AL358472.5-202ENST00000641448 1267 ntBASIC16.23■□□□□ 0.19
O00370 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.23■□□□□ 0.19
O00370 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
O00370 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
O00370 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
O00370 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 AL157414.3-201ENST00000624276 1954 ntBASIC16.22■□□□□ 0.19
O00370 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
O00370 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
O00370 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 RNU1-114P-201ENST00000365297 166 ntBASIC16.22■□□□□ 0.19
O00370 ACKR1-201ENST00000368121 1240 ntBASIC16.22■□□□□ 0.19
O00370 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.22■□□□□ 0.19
O00370 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 COX5BP8-201ENST00000416911 349 ntBASIC16.22■□□□□ 0.19
O00370 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
O00370 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.22■□□□□ 0.19
O00370 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.22■□□□□ 0.19
O00370 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
O00370 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
O00370 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.22■□□□□ 0.19
O00370 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
O00370 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.22■□□□□ 0.19
O00370 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.22■□□□□ 0.19
O00370 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
O00370 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 FGD5P1-202ENST00000614866 2498 ntBASIC16.22■□□□□ 0.19
O00370 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
O00370 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 ACE3P-201ENST00000423435 1973 ntBASIC16.22■□□□□ 0.19
O00370 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.22■□□□□ 0.19
O00370 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
O00370 LINC00552-201ENST00000625151 2579 ntBASIC16.22■□□□□ 0.19
O00370 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
O00370 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
O00370 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.21■□□□□ 0.19
O00370 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
O00370 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
O00370 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.21■□□□□ 0.19
O00370 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
O00370 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.21■□□□□ 0.19
O00370 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms