Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ISCA2P1-201ENST00000425548 448 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC078991.1-201ENST00000437297 610 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC022616.1-201ENST00000518688 554 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC092171.5-201ENST00000608012 942 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC006449.6-201ENST00000612330 2296 ntBASIC14.82□□□□□ -0.04
C4orf47A7E2U8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
C4orf47A7E2U8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 RN7SKP214-201ENST00000364208 315 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PUDPP3-201ENST00000445368 636 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 KRT18P66-201ENST00000452970 1269 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 AC242376.1-201ENST00000559033 726 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 AC100827.2-201ENST00000563214 1194 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 AC132192.2-201ENST00000596206 1147 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.81□□□□□ -0.04
C4orf47A7E2U8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.81□□□□□ -0.04
C4orf47A7E2U8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms