Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AC104457.1-201ENST00000401024 814 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AL355306.1-201ENST00000415580 579 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 MED15P5-201ENST00000423150 992 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AL671277.1-201ENST00000429656 993 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 SLC25A1P1-201ENST00000528351 927 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
CTAGE9A4FU28 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTAGE9A4FU28 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 FO393414.2-201ENST00000405153 598 ntBASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AL591424.1-201ENST00000442569 1213 ntBASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AC027601.4-201ENST00000611259 610 ntBASIC16.3■□□□□ 0.2
CTAGE9A4FU28 AL513190.1-201ENST00000621254 727 ntBASIC16.3■□□□□ 0.2
CTAGE9A4FU28 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.3■□□□□ 0.2
CTAGE9A4FU28 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 LILRP1-201ENST00000444199 1370 ntBASIC16.29■□□□□ 0.2
CTAGE9A4FU28 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.29■□□□□ 0.2
CTAGE9A4FU28 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTAGE9A4FU28 TARDBPP1-201ENST00000442013 1203 ntBASIC16.29■□□□□ 0.2
CTAGE9A4FU28 KRT18P3-201ENST00000451602 1288 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms