Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 KRT18P58-201ENST00000527480 1120 ntBASIC16.62■□□□□ 0.25
CCDC66A2RUB6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 LINC01225-203ENST00000563550 1244 ntBASIC16.62■□□□□ 0.25
CCDC66A2RUB6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 BX640514.1-201ENST00000583223 1918 ntBASIC16.62■□□□□ 0.25
CCDC66A2RUB6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC089987.1-201ENST00000551654 2209 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC079140.1-201ENST00000508039 487 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 POLD2P1-201ENST00000511220 997 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 IGHV3-62-201ENST00000520057 340 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 AC092135.3-201ENST00000624151 1846 ntBASIC16.61■□□□□ 0.25
CCDC66A2RUB6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC66A2RUB6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC66A2RUB6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms