Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC004898.1-201ENST00000451057 766 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AL591846.1-201ENST00000451736 433 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC011477.6-201ENST00000604980 1927 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC106872.11-201ENST00000605838 421 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC020658.6-201ENST00000623564 1870 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 BX539320.1-201ENST00000623759 877 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AL008638.5-201ENST00000623814 1298 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AC006453.4-201ENST00000636949 1252 ntBASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 AP002414.2-201ENST00000591780 3365 ntBASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGA9Q9Y5G4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 AL109954.1-202ENST00000564051 2148 ntBASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 AL009178.2-201ENST00000597278 2719 ntBASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGA9Q9Y5G4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGA9Q9Y5G4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms