Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AC004840.1-201ENST00000636359 365 ntBASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF11Q9Y3C5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC004890.2-204ENST00000481968 304 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC135586.1-201ENST00000539323 574 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC106028.4-201ENST00000614509 607 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AL158212.4-201ENST00000624062 1286 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC107918.4-201ENST00000641966 3141 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 CLK3P2-201ENST00000427566 1453 ntBASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RNF11Q9Y3C5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF11Q9Y3C5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms