Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AC004461.1-201ENST00000412461 403 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 MTND6P24-201ENST00000440466 518 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AP000344.2-201ENST00000512987 629 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AC004835.2-201ENST00000603762 682 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 RN7SL828P-201ENST00000607615 303 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGB4Q9UN71 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 MBLAC2-202ENST00000514906 1936 ntBASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGB4Q9UN71 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGB4Q9UN71 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms