Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AL627422.1-201ENST00000434104 580 ntBASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 MIR6756-201ENST00000616240 63 ntBASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AC009084.3-201ENST00000623356 437 ntBASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC52A1Q9NWF4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 TMBIM7P-202ENST00000641474 1516 ntBASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 AHCYP4-201ENST00000419201 1315 ntBASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 AC079112.1-201ENST00000454972 939 ntBASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RPL18AP3-201ENST00000462885 528 ntBASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 MVK-217ENST00000639206 367 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC52A1Q9NWF4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 KRT18P66-201ENST00000452970 1269 ntBASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 MIR4522-201ENST00000584932 87 ntBASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 MIR6858-201ENST00000620733 67 ntBASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 AC092299.1-201ENST00000632679 757 ntBASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC52A1Q9NWF4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC52A1Q9NWF4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.32■■□□□ 1
SLC52A1Q9NWF4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC114947.1-202ENST00000514136 344 ntBASIC21.32■■□□□ 1
SLC52A1Q9NWF4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms