Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 KRT18P64-201ENST00000434946 1219 ntBASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 BX640514.1-201ENST00000583223 1918 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 LINC01230-201ENST00000625222 3017 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CICP4-201ENST00000447359 2812 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC010336.2-201ENST00000564226 506 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC051619.7-201ENST00000568314 623 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC015911.4-201ENST00000588022 1070 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC007787.1-201ENST00000588095 1583 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 AC126335.2-201ENST00000623362 4637 ntBASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J3Q9H1A7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms