Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 NFIC-211ENST00000641145 8399 ntBASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AC079112.1-201ENST00000454972 939 ntBASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AC090857.1-201ENST00000527400 390 ntBASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
UBE2OQ9C0C9 AC092364.2-201ENST00000596710 2692 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC010234.1-201ENST00000494599 870 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 MARK2P5-201ENST00000507649 634 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC242376.1-201ENST00000559033 726 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC134407.2-201ENST00000625089 1978 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 TSPY26P-202ENST00000565928 3884 ntBASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBE2OQ9C0C9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 AC004899.1-201ENST00000424687 1714 ntBASIC16.73■□□□□ 0.27
UBE2OQ9C0C9 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms