Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AL136309.1-201ENST00000403917 691 ntBASIC15.81■□□□□ 0.12
LRRC3Q9BY71 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC004945.1-201ENST00000416738 983 ntBASIC15.81■□□□□ 0.12
LRRC3Q9BY71 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC005730.2-201ENST00000564549 1184 ntBASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 AC092850.2-201ENST00000623821 2697 ntBASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PRAL-201ENST00000624952 3286 ntBASIC15.81■□□□□ 0.12
LRRC3Q9BY71 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC3Q9BY71 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.8■□□□□ 0.12
LRRC3Q9BY71 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 AL354877.1-201ENST00000424412 413 ntBASIC15.8■□□□□ 0.12
LRRC3Q9BY71 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 REXO1L4P-201ENST00000605109 1937 ntBASIC15.8■□□□□ 0.12
LRRC3Q9BY71 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC3Q9BY71 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AP000593.2-201ENST00000542775 1433 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms