Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 KRT19P4-201ENST00000443208 943 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AP000533.1-201ENST00000456143 1177 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 RN7SL128P-201ENST00000467883 305 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 RN7SL665P-201ENST00000578793 300 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AC005274.1-201ENST00000623460 802 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AC020763.4-201ENST00000623414 4170 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 AC098818.2-201ENST00000564925 2320 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RN7SKP230-201ENST00000365642 335 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ASS1P1-201ENST00000402854 1237 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 U3.41-201ENST00000408711 219 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 IGHV1-12-201ENST00000518307 205 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 HNRNPA1P72-201ENST00000529511 967 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 MIR4746-201ENST00000579802 71 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RN7SL480P-201ENST00000581481 294 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COL25A1Q9BXS0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 AC090164.3-201ENST00000610780 2143 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 RN7SL788P-201ENST00000460504 316 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 VENTXP3-201ENST00000546480 773 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 KRT8P1-201ENST00000557533 1207 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms