Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 AC007292.2-201ENST00000593524 1812 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 MIR326-201ENST00000362220 95 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 RNU1-114P-201ENST00000365297 166 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 KRT8P13-201ENST00000463294 1010 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 AC005695.3-201ENST00000614522 232 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 BX539320.1-201ENST00000623759 877 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPAP1Q9BWH6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AL009178.2-201ENST00000597278 2719 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 LINC00552-201ENST00000625151 2579 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 CD8B2-202ENST00000417670 633 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AL590640.2-201ENST00000457038 527 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 AJ011931.1-201ENST00000618749 2492 ntBASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPAP1Q9BWH6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 WASH3P-207ENST00000560956 1394 ntBASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPAP1Q9BWH6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms