Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VGLL1Q99990 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 KRT8P12-202ENST00000472924 1397 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VGLL1Q99990 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 AC018529.2-202ENST00000611482 3087 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 AC010327.5-201ENST00000586923 3061 ntBASIC11.62□□□□□ -0.55
VGLL1Q99990 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.62□□□□□ -0.55
VGLL1Q99990 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
VGLL1Q99990 MIR574-201ENST00000385209 96 ntBASIC11.62□□□□□ -0.55
VGLL1Q99990 RBPMS2P1-201ENST00000437762 623 ntBASIC11.62□□□□□ -0.55
VGLL1Q99990 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.62□□□□□ -0.55
VGLL1Q99990 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.62□□□□□ -0.55
VGLL1Q99990 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.62□□□□□ -0.55
VGLL1Q99990 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.62□□□□□ -0.55
VGLL1Q99990 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
VGLL1Q99990 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
VGLL1Q99990 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VGLL1Q99990 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VGLL1Q99990 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.61□□□□□ -0.55
VGLL1Q99990 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms