Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC211486.1-202ENST00000416371 468 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC112482.1-201ENST00000492080 688 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 AC211476.1-201ENST00000503899 468 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AC010327.4-202ENST00000591484 748 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
TRGV9Q99603 SPDYE12P-201ENST00000618416 771 ntBASIC11.9□□□□□ -0.5
TRGV9Q99603 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TRGV9Q99603 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV9Q99603 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV9Q99603 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV9Q99603 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV9Q99603 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV9Q99603 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.9□□□□□ -0.51
TRGV9Q99603 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV9Q99603 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV9Q99603 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TRGV9Q99603 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 RPSAP43-201ENST00000402237 625 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TRGV9Q99603 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV9Q99603 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV9Q99603 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AL138828.2-201ENST00000615812 383 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 AC073592.8-201ENST00000624126 511 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV9Q99603 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms