Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 AL136982.4-201ENST00000437689 1740 ntBASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP6Q96FZ7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 AC004877.2-201ENST00000623941 599 ntBASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 AC025580.3-201ENST00000617932 1424 ntBASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.4■□□□□ 0.06
CHMP6Q96FZ7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms