Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC46Q96FV0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC46Q96FV0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC023157.3-201ENST00000619086 2088 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 BRWD1P1-201ENST00000401091 371 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 KRT18P43-201ENST00000469825 1281 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 USP32P1-208ENST00000506594 1164 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FAM8A2P-201ENST00000528813 1142 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AL359711.2-201ENST00000563105 872 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AP001063.1-201ENST00000568332 529 ntBASIC13.84□□□□□ -0.19
LRRC46Q96FV0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC46Q96FV0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.83□□□□□ -0.19
LRRC46Q96FV0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LRRC46Q96FV0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRC46Q96FV0 AC092053.3-201ENST00000641308 4975 ntBASIC13.83□□□□□ -0.19
LRRC46Q96FV0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRC46Q96FV0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 REXO1L8P-201ENST00000604378 1897 ntBASIC13.83□□□□□ -0.2
LRRC46Q96FV0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.83□□□□□ -0.2
LRRC46Q96FV0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 C2orf27AP3-201ENST00000434123 579 ntBASIC13.83□□□□□ -0.2
LRRC46Q96FV0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC46Q96FV0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms