Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC004877.2-201ENST00000623941 599 ntBASIC13.25□□□□□ -0.29
BEST4Q8NFU0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BEST4Q8NFU0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.24□□□□□ -0.29
BEST4Q8NFU0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 RNA5SP415-201ENST00000517246 115 ntBASIC13.24□□□□□ -0.29
BEST4Q8NFU0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AL138918.1-201ENST00000568306 659 ntBASIC13.24□□□□□ -0.29
BEST4Q8NFU0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 AC116407.3-201ENST00000623905 1129 ntBASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BEST4Q8NFU0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC002056.1-201ENST00000395613 760 ntBASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AL031284.1-201ENST00000419297 478 ntBASIC13.23□□□□□ -0.29
BEST4Q8NFU0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.23□□□□□ -0.29
BEST4Q8NFU0 AC093909.1-201ENST00000504731 1122 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms