Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL5P21-201ENST00000404620 815 ntBASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 VDAC1P7-201ENST00000462417 847 ntBASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 WASH4P-201ENST00000564273 1246 ntBASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 DRD5P1-201ENST00000456605 1438 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC093004.1-201ENST00000508850 424 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC055876.2-201ENST00000531834 546 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC123567.1-201ENST00000548294 1261 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AC036164.1-201ENST00000570544 333 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 AL049840.4-201ENST00000602422 811 ntBASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIMC1Q8NDZ2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AC041040.2-201ENST00000622926 2899 ntBASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms