Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCN4BQ8IWT1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 AC023024.2-201ENST00000623561 1993 ntBASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 AC006453.4-201ENST00000636949 1252 ntBASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
SCN4BQ8IWT1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 AC012508.2-201ENST00000567613 1472 ntBASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCN4BQ8IWT1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 FAM86MP-201ENST00000340703 885 ntBASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AC245100.3-201ENST00000441281 285 ntBASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AL355994.2-201ENST00000447882 704 ntBASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms