Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AC013726.1-201ENST00000563747 2285 ntBASIC20.27■□□□□ 0.84
NME9Q86XW9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AL008707.1-201ENST00000422498 534 ntBASIC20.27■□□□□ 0.84
NME9Q86XW9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.27■□□□□ 0.84
NME9Q86XW9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.27■□□□□ 0.84
NME9Q86XW9 PUDPP3-201ENST00000445368 636 ntBASIC20.27■□□□□ 0.84
NME9Q86XW9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.27■□□□□ 0.84
NME9Q86XW9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 AC079336.7-201ENST00000623428 1078 ntBASIC20.27■□□□□ 0.84
NME9Q86XW9 AC100757.4-201ENST00000626934 759 ntBASIC20.27■□□□□ 0.84
NME9Q86XW9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.27■□□□□ 0.83
NME9Q86XW9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NME9Q86XW9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
NME9Q86XW9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.26■□□□□ 0.83
NME9Q86XW9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.26■□□□□ 0.83
NME9Q86XW9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.26■□□□□ 0.83
NME9Q86XW9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.26■□□□□ 0.83
NME9Q86XW9 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.26■□□□□ 0.83
NME9Q86XW9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.26■□□□□ 0.83
NME9Q86XW9 AC005962.1-201ENST00000584100 773 ntBASIC20.26■□□□□ 0.83
NME9Q86XW9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
NME9Q86XW9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NME9Q86XW9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.26■□□□□ 0.83
NME9Q86XW9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 AC126365.1-201ENST00000578585 1514 ntBASIC20.26■□□□□ 0.83
NME9Q86XW9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NME9Q86XW9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NME9Q86XW9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.26■□□□□ 0.83
NME9Q86XW9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 HINT2P1-201ENST00000419438 481 ntBASIC20.25■□□□□ 0.83
NME9Q86XW9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
NME9Q86XW9 SCARNA21-201ENST00000517026 139 ntBASIC20.25■□□□□ 0.83
NME9Q86XW9 AC103988.2-201ENST00000561804 725 ntBASIC20.25■□□□□ 0.83
NME9Q86XW9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 MIR3907-201ENST00000579424 151 ntBASIC20.25■□□□□ 0.83
NME9Q86XW9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.25■□□□□ 0.83
NME9Q86XW9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.25■□□□□ 0.83
NME9Q86XW9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NME9Q86XW9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.25■□□□□ 0.83
NME9Q86XW9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms