Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AC106881.1-201ENST00000605849 3329 ntBASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AGAP7P-201ENST00000582299 2062 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AGAP14-201ENST00000624701 2060 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 MSTO2P-201ENST00000314835 1709 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 OR8S1-201ENST00000310194 1080 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AC093433.1-201ENST00000458048 571 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AC098799.1-201ENST00000504752 800 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 REXO1L5P-201ENST00000622260 2098 ntBASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD3Q7Z3D4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AC005089.1-201ENST00000619486 2241 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AL645937.2-201ENST00000396808 931 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 TMEM14DP-201ENST00000422205 345 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 NUS1P3-201ENST00000423502 862 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms