Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC142381.1-201ENST00000426099 345 ntBASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC004877.2-201ENST00000623941 599 ntBASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 DGCR9-201ENST00000609630 2415 ntBASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.71□□□□□ -0.38
ANKRD55Q3KP44 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AC007787.1-201ENST00000588095 1583 ntBASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 BX842568.4-201ENST00000421222 227 ntBASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 KRT19P2-202ENST00000557173 1012 ntBASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 AC027307.2-201ENST00000591252 911 ntBASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.7□□□□□ -0.38
ANKRD55Q3KP44 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms