Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 E2F3P2-201ENST00000447755 1422 ntBASIC18.04■□□□□ 0.48
PDS5AQ29RF7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDS5AQ29RF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 AC138035.3-201ENST00000622706 2791 ntBASIC18.03■□□□□ 0.48
PDS5AQ29RF7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 ACE3P-201ENST00000423435 1973 ntBASIC18.03■□□□□ 0.48
PDS5AQ29RF7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 AC013355.1-201ENST00000562625 723 ntBASIC18.03■□□□□ 0.48
PDS5AQ29RF7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 AL606495.2-201ENST00000605867 535 ntBASIC18.03■□□□□ 0.48
PDS5AQ29RF7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.03■□□□□ 0.48
PDS5AQ29RF7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 HIST2H2BC-201ENST00000498492 580 ntBASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC022217.1-201ENST00000521069 738 ntBASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC100827.2-201ENST00000563214 1194 ntBASIC18.02■□□□□ 0.48
PDS5AQ29RF7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AL645939.5-201ENST00000606834 243 ntBASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 AC068587.8-201ENST00000641239 219 ntBASIC18.02■□□□□ 0.48
PDS5AQ29RF7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDS5AQ29RF7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PDS5AQ29RF7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDS5AQ29RF7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms