Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AL607033.1-201ENST00000623900 1599 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 GPS2P2-201ENST00000430745 888 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 SPDYE14P-201ENST00000442619 822 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 KLF2P3-201ENST00000451977 1087 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AC125807.1-201ENST00000483097 614 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AC018529.1-201ENST00000613063 361 ntBASIC13.8□□□□□ -0.2
SLC3A1Q07837 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 RPL5P21-201ENST00000404620 815 ntBASIC13.79□□□□□ -0.2
SLC3A1Q07837 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.79□□□□□ -0.2
SLC3A1Q07837 AC107890.1-201ENST00000422478 521 ntBASIC13.79□□□□□ -0.2
SLC3A1Q07837 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 AL355385.1-201ENST00000606123 409 ntBASIC13.79□□□□□ -0.2
SLC3A1Q07837 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC3A1Q07837 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC3A1Q07837 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms