Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.67□□□□□ -0.22
SCN1BQ07699 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.67□□□□□ -0.22
SCN1BQ07699 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.67□□□□□ -0.22
SCN1BQ07699 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 CR383656.2-201ENST00000548656 2254 ntBASIC13.67□□□□□ -0.22
SCN1BQ07699 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SCN1BQ07699 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN1BQ07699 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN1BQ07699 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SCN1BQ07699 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.66□□□□□ -0.22
SCN1BQ07699 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.66□□□□□ -0.22
SCN1BQ07699 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SCN1BQ07699 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.66□□□□□ -0.22
SCN1BQ07699 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SCN1BQ07699 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.66□□□□□ -0.22
SCN1BQ07699 AL138918.1-201ENST00000568306 659 ntBASIC13.66□□□□□ -0.22
SCN1BQ07699 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.66□□□□□ -0.22
SCN1BQ07699 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SCN1BQ07699 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.66□□□□□ -0.22
SCN1BQ07699 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SCN1BQ07699 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SCN1BQ07699 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.66□□□□□ -0.22
SCN1BQ07699 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN1BQ07699 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCN1BQ07699 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.65□□□□□ -0.22
SCN1BQ07699 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCN1BQ07699 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCN1BQ07699 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SCN1BQ07699 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.65□□□□□ -0.22
SCN1BQ07699 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SCN1BQ07699 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCN1BQ07699 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SCN1BQ07699 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SCN1BQ07699 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms