Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CX3CL1P78423 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.35□□□□□ -0.43
CX3CL1P78423 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CX3CL1P78423 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CX3CL1P78423 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CX3CL1P78423 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CX3CL1P78423 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CX3CL1P78423 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CX3CL1P78423 AC005912.2-201ENST00000619492 2400 ntBASIC12.35□□□□□ -0.43
CX3CL1P78423 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.34□□□□□ -0.43
CX3CL1P78423 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 MEP1AP4-201ENST00000423244 1087 ntBASIC12.34□□□□□ -0.43
CX3CL1P78423 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 BCRP1-201ENST00000444246 691 ntBASIC12.34□□□□□ -0.43
CX3CL1P78423 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.34□□□□□ -0.43
CX3CL1P78423 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.34□□□□□ -0.43
CX3CL1P78423 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
CX3CL1P78423 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.34□□□□□ -0.43
CX3CL1P78423 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 AL158212.4-201ENST00000624062 1286 ntBASIC12.34□□□□□ -0.43
CX3CL1P78423 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.34□□□□□ -0.43
CX3CL1P78423 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.34□□□□□ -0.43
CX3CL1P78423 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CX3CL1P78423 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.34□□□□□ -0.43
CX3CL1P78423 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CX3CL1P78423 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CX3CL1P78423 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.33□□□□□ -0.44
CX3CL1P78423 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 KRT8P44-201ENST00000441609 1350 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 AC126365.1-201ENST00000578585 1514 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CX3CL1P78423 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 GNAQP1-201ENST00000444815 1067 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CX3CL1P78423 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.33□□□□□ -0.44
CX3CL1P78423 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.33□□□□□ -0.44
CX3CL1P78423 AC023310.3-201ENST00000557027 670 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 SPCS2P1-201ENST00000561636 679 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 AC100756.1-201ENST00000562736 682 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 RARRES2P5-201ENST00000564013 466 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 AC138749.3-201ENST00000567691 622 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.33□□□□□ -0.44
CX3CL1P78423 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms