Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB5BP61020 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB5BP61020 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB5BP61020 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB5BP61020 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
RAB5BP61020 HLA-L-209ENST00000420110 1011 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 AC007663.1-201ENST00000438948 1240 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.92□□□□□ -0.5
RAB5BP61020 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.92□□□□□ -0.5
RAB5BP61020 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB5BP61020 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 AC092666.2-201ENST00000613287 246 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 AC073648.6-201ENST00000641589 218 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
RAB5BP61020 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAB5BP61020 TNRC18P1-201ENST00000502875 3650 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 AL445209.1-201ENST00000607269 3491 ntBASIC11.92□□□□□ -0.5
RAB5BP61020 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB5BP61020 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB5BP61020 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RAB5BP61020 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 INE2-201ENST00000630399 1874 ntBASIC11.91□□□□□ -0.5
RAB5BP61020 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB5BP61020 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB5BP61020 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB5BP61020 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB5BP61020 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB5BP61020 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms