Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S2P56377 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 AC098850.1-201ENST00000419919 790 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP1S2P56377 HLA-K-203ENST00000430151 1046 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S2P56377 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 TERF1P3-201ENST00000505638 1227 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.85□□□□□ -0.03
AP1S2P56377 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S2P56377 AC140912.1-201ENST00000577171 1054 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 CHCHD2P3-201ENST00000603038 451 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 AL603764.1-201ENST00000636452 321 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.85□□□□□ -0.03
AP1S2P56377 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S2P56377 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
AP1S2P56377 CICP24-201ENST00000605464 2705 ntBASIC14.85□□□□□ -0.03
AP1S2P56377 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
AP1S2P56377 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 AL157414.3-201ENST00000624276 1954 ntBASIC14.84□□□□□ -0.03
AP1S2P56377 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 AL139094.1-201ENST00000405549 1188 ntBASIC14.84□□□□□ -0.03
AP1S2P56377 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S2P56377 AC114812.1-204ENST00000449669 728 ntBASIC14.84□□□□□ -0.03
AP1S2P56377 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.84□□□□□ -0.03
AP1S2P56377 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.84□□□□□ -0.03
AP1S2P56377 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP1S2P56377 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP1S2P56377 KRT8P14-201ENST00000414254 1442 ntBASIC14.83□□□□□ -0.03
AP1S2P56377 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.83□□□□□ -0.03
AP1S2P56377 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
AP1S2P56377 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 AL161772.1-201ENST00000610494 4412 ntBASIC14.83□□□□□ -0.03
AP1S2P56377 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
AP1S2P56377 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
AP1S2P56377 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S2P56377 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S2P56377 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
AP1S2P56377 AL162726.2-201ENST00000438986 1017 ntBASIC14.83□□□□□ -0.04
AP1S2P56377 ELK1P1-201ENST00000485699 580 ntBASIC14.83□□□□□ -0.04
AP1S2P56377 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S2P56377 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.83□□□□□ -0.04
AP1S2P56377 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S2P56377 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.83□□□□□ -0.04
AP1S2P56377 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP1S2P56377 SPDYE22P-201ENST00000582158 798 ntBASIC14.83□□□□□ -0.04
AP1S2P56377 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S2P56377 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S2P56377 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms