Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.22■□□□□ 0.19
CDH8P55286 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH8P55286 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH8P55286 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH8P55286 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH8P55286 ACA64.2-201ENST00000459014 129 ntBASIC16.22■□□□□ 0.19
CDH8P55286 AC026434.2-201ENST00000506094 1078 ntBASIC16.22■□□□□ 0.19
CDH8P55286 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 SNX29P1-201ENST00000548357 1007 ntBASIC16.22■□□□□ 0.19
CDH8P55286 AC025279.2-201ENST00000569730 653 ntBASIC16.22■□□□□ 0.19
CDH8P55286 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH8P55286 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 PDIA3P1-201ENST00000471856 1510 ntBASIC16.22■□□□□ 0.19
CDH8P55286 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH8P55286 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH8P55286 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH8P55286 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 AJ011931.1-201ENST00000618749 2492 ntBASIC16.21■□□□□ 0.19
CDH8P55286 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 ANKRD19P-201ENST00000338192 862 ntBASIC16.21■□□□□ 0.19
CDH8P55286 MIR1909-201ENST00000411312 80 ntBASIC16.21■□□□□ 0.19
CDH8P55286 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 AC016694.1-201ENST00000434179 700 ntBASIC16.21■□□□□ 0.19
CDH8P55286 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH8P55286 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH8P55286 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH8P55286 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH8P55286 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH8P55286 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH8P55286 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH8P55286 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH8P55286 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH8P55286 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH8P55286 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CDH8P55286 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH8P55286 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH8P55286 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH8P55286 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH8P55286 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH8P55286 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH8P55286 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms