Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.81■□□□□ 0.12
EPHB3P54753 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHB3P54753 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.81■□□□□ 0.12
EPHB3P54753 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHB3P54753 AL451050.2-201ENST00000606967 682 ntBASIC15.81■□□□□ 0.12
EPHB3P54753 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.81■□□□□ 0.12
EPHB3P54753 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EPHB3P54753 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EPHB3P54753 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHB3P54753 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EPHB3P54753 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHB3P54753 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHB3P54753 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 SLC25A24P2-201ENST00000415059 510 ntBASIC15.8■□□□□ 0.12
EPHB3P54753 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.8■□□□□ 0.12
EPHB3P54753 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.8■□□□□ 0.12
EPHB3P54753 SERPINA13P-202ENST00000478994 924 ntBASIC15.8■□□□□ 0.12
EPHB3P54753 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 MIR4683-201ENST00000579659 81 ntBASIC15.8■□□□□ 0.12
EPHB3P54753 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHB3P54753 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EPHB3P54753 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHB3P54753 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 AL359258.3-201ENST00000622910 2331 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 RN7SKP175-201ENST00000408472 289 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHB3P54753 EIF4HP1-201ENST00000453115 687 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.79■□□□□ 0.12
EPHB3P54753 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 ACTG1P17-201ENST00000558391 1119 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 AC005730.2-201ENST00000564549 1184 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHB3P54753 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.79■□□□□ 0.12
EPHB3P54753 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.79■□□□□ 0.12
EPHB3P54753 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 AL136301.1-201ENST00000615830 422 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 AL023803.2-201ENST00000620080 638 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 AC002472.3-201ENST00000640124 621 ntBASIC15.79■□□□□ 0.12
EPHB3P54753 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
EPHB3P54753 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
EPHB3P54753 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EPHB3P54753 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms